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Novel Insights into Antiviral Gene Regulation of Red Swamp Crayfish, Procambarus clarkii, Infected with White Spot Syndrome Virus

Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Key Lab of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Fisheries, Huazhong Agricultural University, Wuhan 430070, China
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Received: 30 September 2017 / Revised: 3 November 2017 / Accepted: 9 November 2017 / Published: 10 November 2017
(This article belongs to the Section Animal Genetics and Genomics)
White spot syndrome virus (WSSV), one of the major pathogens of Procambarus clarkii, has caused severe disruption to the aquaculture industry of P. clarkii in China. To reveal the gene regulatory mechanisms underlying WSSV infection, a comparative transcriptome analysis was performed among WSSV-infected susceptible individuals (GS), viral resistant individuals (GR), and a non-infected control group (GC). A total of 61,349 unigenes were assembled from nine libraries. Subsequently, 515 and 1033 unigenes exhibited significant differential expression in sensitive and resistant crayfish individuals compared to the control group (GC). Many differentially expressed genes (e.g., C-type lectin 4, Peroxinectin, Prophenoloxidase, and Serine/threonine-protein kinase) observed in GR and GS play critical roles in pathogen recognition and viral defense reactions after WSSV infection. Importantly, the glycosaminoglycan biosynthesis-chondroitin sulfate/dermatan sulfate pathway was identified to play critical roles in defense to WSSV infection for resistant crayfish individuals by upregulating the chondroitin sulfate related genes for the synthesis of WSSV-sensitive, functional chondroitin sulfate chains containing E units. Numerous genes and the key pathways identified between resistant and susceptible P. clarkii individuals provide valuable insights regarding antiviral response mechanisms of decapoda species and may help to improve the selective breeding of P. clarkii WSSV-resistance. View Full-Text
Keywords: Procambarus clarkii; RNA-Seq; white spot syndrome virus; immune response Procambarus clarkii; RNA-Seq; white spot syndrome virus; immune response
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MDPI and ACS Style

Yi, S.; Li, Y.; Shi, L.; Zhang, L. Novel Insights into Antiviral Gene Regulation of Red Swamp Crayfish, Procambarus clarkii, Infected with White Spot Syndrome Virus. Genes 2017, 8, 320. https://0-doi-org.brum.beds.ac.uk/10.3390/genes8110320

AMA Style

Yi S, Li Y, Shi L, Zhang L. Novel Insights into Antiviral Gene Regulation of Red Swamp Crayfish, Procambarus clarkii, Infected with White Spot Syndrome Virus. Genes. 2017; 8(11):320. https://0-doi-org.brum.beds.ac.uk/10.3390/genes8110320

Chicago/Turabian Style

Yi, Shaokui, Yanhe Li, Linlin Shi, and Long Zhang. 2017. "Novel Insights into Antiviral Gene Regulation of Red Swamp Crayfish, Procambarus clarkii, Infected with White Spot Syndrome Virus" Genes 8, no. 11: 320. https://0-doi-org.brum.beds.ac.uk/10.3390/genes8110320

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