Topical Collection "Genomic Databases"
A topical collection in Genes (ISSN 2073-4425).
Interests: plant genomics; evolutionary genomics; polyploidy; bioinformatics; databases; sequence assembly; solanacea; domestication
Special Issues and Collections in MDPI journals
The development of next-generation sequencing (NGS) at the beginning of 21st century has produced an incredible amount of sequencing data. The data have been used in a wide range of scientific studies, from the development of reference genomes to expression profiling of thousands of genes. Due to the data volume as well as the complexity of the data, they need special platforms in order to be efficiently managed and made accessible to the community.
There are different types of platforms, from gigantic genomic data repositories with little data curation such as GenBank, ENA or the Genome Sequence Archive to project-specific genomic databases with variable levels of data curation. The levels of data curation are one of the determining factors not only in the usability of these platforms, but also in how they meet the needs of the specific communities that they target. Most of these databases have associated popular tools with graphical interfaces, such as BLAST, Gbrowser and JBrowser. Others may have developed their specific set of tools to present data specifically linked to a project.
The goal of this collection is to present to the scientific community some genomic databases that have been developed in recent years.
In order to maximize the usability of the publications associated with the databases, we propose a “concept paper” format.
Dr. Aureliano Bombarely
Manuscript Submission Information
Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All papers will be peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the collection website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.
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- data curation
- genomic data analysis