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A Box of Enzymes for Multiple Diseases: Discovering the Truly Role of Selective HDAC Inhibitors

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Genetics and Genomics".

Deadline for manuscript submissions: closed (25 October 2022) | Viewed by 5736

Special Issue Editor


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Guest Editor
Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy
Interests: medicinal chemistry; drug discovery and development; multitargeting compounds; FAAH inhibitors; MAGL inhibitors; HDAC inhibitors; neurodegeneration; retinal diseases; multiple sclerosis; cancer

Special Issue Information

Dear Colleagues,

A fine tuning of the epigenetic processes regulates gene transcription and genomic stability and maintains normal cell growth, development, and differentiation. Histone deacetylases (HDACs), also termed epigenetic erasers, are responsible for deacetylating the lysine residues on the tails of histones, thereby modifying chromatin structure and gene expression. There are non-histone proteins and several cytoplasmic proteins that are regulated by HDACs, as well. Various HDAC inhibitors (HDACis), endowed or not with isoform selectivity, have been developed for over three decades. To date, however, only five HDACis have been approved for cancer therapy. Nevertheless, HDACis hold promising potential therapeutic utility for other diseases, including neurological disorders and retinal and cardiovascular diseases. In the frame of selective inhibition of one of the 18 the HDAC isoforms (11 with a zinc-dependent enzymes and 7 sirtuins), a promising and challenging task is the discovery of proteolysis-targeting chimeras (PROTACs). HDAC based-PROTACS are heterobifunctional molecules that couple an HDAC ligand with a ligand for an E3 ligase such that the HDAC enzyme becomes polyubiquitinated and degraded by the proteasome. This emerging field of research could provide a new and innovative approach and deliver a proof of concept for the selective inhibition of a specific HDAC isoform in a certain diseases.

In this frame, we would like to invite original articles and reviews focusing on the understanding of the role of HDACi and the HDAC enzyme in various disease states, also including medicinal chemistry efforts around the design of new candidate inhibitors. In addition, articles associated with model disease systems, drug resistance, and therapy, with an eye on the most modern approaches, would be of high value for this Special Issue.

Dr. Stefania Butini
Guest Editor

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Keywords

  • Epigenetic regulations
  • Histone modifications
  • Deacetylases of histone lysines
  • Histone deacetylases as chromatin-modifying enzymes 
  • Histone deacetylase inhibitors
  • Role of histone deacetylase inhibitors in cancer, neurological diseases, and immune disorders
  • Histone deacetylase inhibitors in human therapy  Histone-deacetylase-based PROTACs

Published Papers (2 papers)

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Review

43 pages, 15003 KiB  
Review
A Therapeutic Perspective of HDAC8 in Different Diseases: An Overview of Selective Inhibitors
by Anna Fontana, Ilaria Cursaro, Gabriele Carullo, Sandra Gemma, Stefania Butini and Giuseppe Campiani
Int. J. Mol. Sci. 2022, 23(17), 10014; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms231710014 - 02 Sep 2022
Cited by 14 | Viewed by 2815
Abstract
Histone deacetylases (HDACs) are epigenetic enzymes which participate in transcriptional repression and chromatin condensation mechanisms by removing the acetyl moiety from acetylated ε-amino group of histone lysines and other non-histone proteins. In recent years, HDAC8, a class I HDAC, has emerged as a [...] Read more.
Histone deacetylases (HDACs) are epigenetic enzymes which participate in transcriptional repression and chromatin condensation mechanisms by removing the acetyl moiety from acetylated ε-amino group of histone lysines and other non-histone proteins. In recent years, HDAC8, a class I HDAC, has emerged as a promising target for different disorders, including X-linked intellectual disability, fibrotic diseases, cancer, and various neuropathological conditions. Selective HDAC8 targeting is required to limit side effects deriving from the treatment with pan-HDAC inhibitors (HDACis); thus, many endeavours have focused on the development of selective HDAC8is. In addition, polypharmacological approaches have been explored to achieve a synergistic action on multi-factorial diseases or to enhance the drug efficacy. In this frame, proteolysis-targeting chimeras (PROTACs) might be regarded as a dual-targeting approach for attaining HDAC8 proteasomal degradation. This review highlights the most relevant and recent advances relative to HDAC8 validation in various diseases, providing a snapshot of the current selective HDAC8is, with a focus on polyfunctional modulators. Full article
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16 pages, 1017 KiB  
Review
Evaluation of the Therapeutic Potential of Histone Deacetylase 6 Inhibitors for Primary and Metastatic Uveal Melanoma
by Husvinee Sundaramurthi, Zoltán Giricz and Breandán N. Kennedy
Int. J. Mol. Sci. 2022, 23(16), 9378; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms23169378 - 19 Aug 2022
Cited by 3 | Viewed by 2308
Abstract
Patients diagnosed with metastatic uveal melanoma (MUM) have a poor survival prognosis. Unfortunately for this rare disease, there is no known cure and suitable therapeutic options are limited. HDAC6 inhibitors (HDAC6i) are currently in clinical trials for other cancers and show potential beneficial [...] Read more.
Patients diagnosed with metastatic uveal melanoma (MUM) have a poor survival prognosis. Unfortunately for this rare disease, there is no known cure and suitable therapeutic options are limited. HDAC6 inhibitors (HDAC6i) are currently in clinical trials for other cancers and show potential beneficial effects against tumor cell survival in vitro and in vivo. In MUM cells, HDAC6i show an anti-proliferative effect in vitro and in preclinical xenograft models. The use of HDAC6 inhibitors as a treatment option for MUM should be explored further. Therefore, this review discusses (1) what is known about HDAC6i in MUM and (2) whether HDAC6 inhibitors offer a potential therapeutic option for MUM. Full article
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