New Frontiers in Marine-Derived Kinase Modulators

A special issue of Marine Drugs (ISSN 1660-3397).

Deadline for manuscript submissions: closed (31 May 2019) | Viewed by 6067

Special Issue Editor


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School of Basic Pharmaceutical and Toxicological Sciences, College of Pharmacy, University of Louisiana at Monroe, 1800 Bienville Drive, Monroe, LA 71201, USA
Interests: olive phenolics; optimization of bioactive natural product scaffolds; breast cancer migration, invasion, metastasis and recurrence; c-Met/HGF pathway; PCSK9-LDLR interaction inhibitors; computer-aided/rational semisynthetic optimizations of natural products
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Special Issue Information

Dear Colleagues,

Protein kinases are high-affinity cell receptors for several key polypeptide growth factors, cytokines, and hormones. Protein kinases usually have a common kinase catalytic domain, which plays a major role in their cellular functions, including cell shape, survival, and others. Protein kinases may also be associated with additional non-kinase domains, which confer additional selectivity, biological activity, subcellular localization, and binding with other proteins. There are several hundred genes encoding members of the kinase family in the human genome.

Several kinases share similar molecular architectures. Growth factors binding to the kinases induce possible dimerization, activation of their kinase domains through auto-phosphorylation, and generation of binding sites for a series of cytosolic proteins, containing polypeptide segments recruited to activated receptors. These proteins subsequently generate a cascade of events leading to various critical normal and/or pathological cellular responses, such as cell proliferation, migration, differentiation, survival, neovascularization, and tissue repair. Therefore, dysregulated or constitutively activated protein kinases are excellent molecular targets for different targeted therapies in numerous oncological, neurological, and other important human diseases.  

About 50% of today’s pharmaceuticals are natural products or analogs modeled based on or inspired by a natural product parent. Marine natural products have unmatched chemical and biological diversities, unique pharmacophoric features, and chemical space. This Special Issue, entitled “New Frontiers in Marine-Derived Kinase Modulators”, is calling for scientific innovations utilizing marine natural products to modulate protein kinases for different therapeutic directions. Marine Drugs hopes that this Special Issue will attract the attention of the scientific community for the important and unique role of marine natural products as potential future drug entity candidates through selective and differential modulation of diverse protein kinases by marine natural products.

Prof. Dr. Khalid A. El Sayed
Guest Editor

Manuscript Submission Information

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Keywords

  • binding
  • biochemical effects
  • cellular
  • dysregulations
  • enhancers
  • inhibitors
  • kinases
  • marine natural products
  • modulator
  • mutation
  • neurological
  • pharmacophore

Published Papers (1 paper)

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Research

23 pages, 4826 KiB  
Article
Predicting Blood–Brain Barrier Permeability of Marine-Derived Kinase Inhibitors Using Ensemble Classifiers Reveals Potential Hits for Neurodegenerative Disorders
by Fabien Plisson and Andrew M. Piggott
Mar. Drugs 2019, 17(2), 81; https://0-doi-org.brum.beds.ac.uk/10.3390/md17020081 - 29 Jan 2019
Cited by 29 | Viewed by 5660
Abstract
The recent success of small-molecule kinase inhibitors as anticancer drugs has generated significant interest in their application to other clinical areas, such as disorders of the central nervous system (CNS). However, most kinase inhibitor drug candidates investigated to date have been ineffective at [...] Read more.
The recent success of small-molecule kinase inhibitors as anticancer drugs has generated significant interest in their application to other clinical areas, such as disorders of the central nervous system (CNS). However, most kinase inhibitor drug candidates investigated to date have been ineffective at treating CNS disorders, mainly due to poor blood–brain barrier (BBB) permeability. It is, therefore, imperative to evaluate new chemical entities for both kinase inhibition and BBB permeability. Over the last 35 years, marine biodiscovery has yielded 471 natural products reported as kinase inhibitors, yet very few have been evaluated for BBB permeability. In this study, we revisited these marine natural products and predicted their ability to cross the BBB by applying freely available open-source chemoinformatics and machine learning algorithms to a training set of 332 previously reported CNS-penetrant small molecules. We evaluated several regression and classification models, and found that our optimised classifiers (random forest, gradient boosting, and logistic regression) outperformed other models, with overall cross-validated model accuracies of 80%–82% and 78%–80% on external testing. All 3 binary classifiers predicted 13 marine-derived kinase inhibitors with appropriate physicochemical characteristics for BBB permeability. Full article
(This article belongs to the Special Issue New Frontiers in Marine-Derived Kinase Modulators)
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