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Analysis of FAIR Data from Medical Sensors

A special issue of Sensors (ISSN 1424-8220). This special issue belongs to the section "Biomedical Sensors".

Deadline for manuscript submissions: closed (25 November 2021) | Viewed by 3367

Special Issue Editors


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Guest Editor
Department of Communication Systems, Jožef Stefan Institute, Ljubljana, Slovenia
Interests: advanced bio-signal analysis; computer simulations in biomedicine; biomedical applications of data mining and control theory; data mining in sensor networks; ECG body sensors and supporting ECG analysis
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Guest Editor
Department of Knowledge Technologies, Jožef Stefan Institute, Ljubljana, Slovenia
Interests: explainable AI; structured output prediction; analysis of complex systems; ensemble methods; feature ranking and selection; semi-supervised learning
Special Issues, Collections and Topics in MDPI journals

E-Mail Website
Guest Editor
Department of Knowledge Technologies, Jožef Stefan Institute, Ljubljana, Slovenia
Interests: knowledge representation; semantic web technologies; applied ontology; knowledge discovery in databases; analysis of remote sensing data; data stream mining

Special Issue Information

Dear Colleagues,

The development of information technology and telecommunications has reached a level where their usefulness can be applied for healthcare needs towards Telemedicine and Telecare, which represent a promising alternative to traditional hospital admission. This basic premise is included in all strategic plans of the European Union and the rest of the world. Research efforts are focused on the development of devices and instruments that are smaller, simple to use, and reliable. The measurements from these devices, which are novel both in terms of their duration and activity coverage, also require novel approaches to their analysis. Efficient and reliable methods for analysis of signals acquired by wireless body devices will increase the interest in them and will push them forward to become the new standard in patient monitoring and healthcare. These algorithms should be able to deal with different challenges present in the data, including noise and sparsely sampled signals. Moreover, the research community recognizes that the inclusion of data analysis methods throughout the complete data life cycle is the way towards a better understanding of the data. This entails the use of data analysis methods, from data acquisition to data pre-processing, data storage and curation, data modeling, and data visualization methods. By doing so, data can be made FAIR, i.e., the data will adhere to the FAIR data principles: Findable, Accessible, Interoperable, and Reusable. The community further recognizes that some of the necessities in this area are novel measurements and datasets for the proper evaluation and benchmarking of data analysis methods.

This Special Issue welcomes original scientific contributions, as well as case studies and reviews of the state-of-the-art in the topics provided below, in the context of analysis of medical sensor data. Analysis can integrate concepts from different areas, including signal processing, data mining, and knowledge discovery, i.e., approaches ranging from basic algorithms for pre-processing and segmentation of the raw measured signal to more complex algorithms for data analytics, targeting tasks like data and knowledge representation, extraction of new knowledge, and data fusion.

The topics of interest include, but are not limited to:

  • data representation;
  • knowledge representation;
  • FAIR sensor data;
  • explainable artificial intelligence (AI) methods;
  • decision support systems;
  • semantic technologies;
  • ontologies for sensor data;
  • analysis of data streams;
  • benchmarking of analysis methods;
  • sensor data repositories and curation;
  • advanced bio-signal processing and interpretation;
  • monitoring of vital functions with sensor and ICT systems; and
  • wearable sensors and networks.

Dr. Aleksandra Rashkovska
Dr. Dragi Kocev
Dr. Panče Panov
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Sensors is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2600 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • Medical sensor data
  • FAIR data
  • Explainable AI
  • Wearable sensors
  • Bio-signal processing

Published Papers (1 paper)

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Research

33 pages, 1089 KiB  
Article
Potential of Point-of-Care and At-Home Assessment of Immune Status via Rapid Cytokine Detection and Questionnaire-Based Anamnesis
by Noor Jamaludeen, Christian Beyer, Ulrike Billing, Katrin Vogel, Monika Brunner-Weinzierl and Myra Spiliopoulou
Sensors 2021, 21(15), 4960; https://0-doi-org.brum.beds.ac.uk/10.3390/s21154960 - 21 Jul 2021
Cited by 5 | Viewed by 2753
Abstract
Monitoring the immune system’s status has emerged as an urgent demand in critical health conditions. The circulating cytokine levels in the blood reflect a thorough insight into the immune system status. Indeed, measuring one cytokine may deliver more information equivalent to detecting multiple [...] Read more.
Monitoring the immune system’s status has emerged as an urgent demand in critical health conditions. The circulating cytokine levels in the blood reflect a thorough insight into the immune system status. Indeed, measuring one cytokine may deliver more information equivalent to detecting multiple diseases at a time. However, if the reported cytokine levels are interpreted with considering lifestyle and any comorbid health conditions for the individual, this will promote a more precise assessment of the immune status. Therefore, this study addresses the most recent advanced assays that deliver rapid, accurate measuring of the cytokine levels in human blood, focusing on add-on potentials for point-of-care (PoC) or personal at-home usage, and investigates existing health questionnaires as supportive assessment tools that collect all necessary information for the concrete analysis of the measured cytokine levels. We introduced a ten-dimensional featuring of cytokine measurement assays. We found 15 rapid cytokine assays with assay time less than 1 h; some could operate on unprocessed blood samples, while others are mature commercial products available in the market. In addition, we retrieved several health questionnaires that addressed various health conditions such as chronic diseases and psychological issues. Then, we present a machine learning-based solution to determine what makes the immune system fit. To this end, we discuss how to employ topic modeling for deriving the definition of immune fitness automatically from literature. Finally, we propose a prototype model to assess the fitness of the immune system through leveraging the derived definition of the immune fitness, the cytokine measurements delivered by a rapid PoC immunoassay, and the complementary information collected by the health questionnaire about other health factors. In conclusion, we discovered various advanced rapid cytokine detection technologies that are promising candidates for point-of-care or at-home usage; if paired with a health status questionnaire, the assessment of the immune system status becomes solid and we demonstrated potentials for promoting the assessment tool with data mining techniques. Full article
(This article belongs to the Special Issue Analysis of FAIR Data from Medical Sensors)
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