Nucleic Acid Vaccine

A special issue of Vaccines (ISSN 2076-393X). This special issue belongs to the section "DNA and mRNA Vaccines".

Deadline for manuscript submissions: closed (30 November 2022) | Viewed by 20849

Special Issue Editors


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Guest Editor
1. Division of Malaria, Naval Medical Research Center, Washington, DC, USA
2. Walter Reed Army Institute of Research, 503 Robert Grant Avenue, Silver Spring, MD 20910, USA
Interests: malaria; HIV; T-cell immunology; vaccine development; human-immune system humanized mice; type 1 diabetes; immunoprohylaxis

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Guest Editor
Program in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA 02115, USA
Interests: immunology; virology; HIV cure and vaccine; COVID19- vaccine; gene therapy; crispr; phage genetics; phage immune responses
Department of Surgery (Head and Neck Service), Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
Interests: vaccine development; HIV-1; COVID-19; microbiology; immunology; virology

Special Issue Information

Dear Colleagues,

As the world struggles with the ongoing COVID-19 pandemic, mRNA-based vaccines presented a ray of hope to end this pandemic. The swift development and FDA approval of the RNA-based COVID-19 vaccines reignited the interest in nucleic acid-based vaccine development. Indeed, pandemic pathogens warrant the need for an effective vaccine platform with a potential for rapid turnover to roll out millions of vaccine doses. Nucleic acid vaccines have emerged as a next-generation vaccine platform over the conventional vaccines, such as live attenuated, inactivated and subunit vaccines. The nucleic acid vaccine exploits the central dogma of molecular biology, delivering either DNA or RNA with a genetic message to encode the target immunogen. In this Special Issue, entitled “Nucleic acid vaccines,” a collection of research articles focused on the recent scientific and technical progress made in the field of DNA/RNA vaccines will be presented. Nucleic acid vaccine research, targeting not only the emerging and pandemic pathogens, but also the tropical infectious diseases, will be included under this Special Issue. Most of the viral genomes are either RNA or DNA, encoding the viral proteins. Nucleic acid vaccines mimic natural infection, especially viral infection and, hence, have the ability to elicit both the adaptive and innate immune responses. Moreover, unlike protein-based subunit vaccines, nucleic acid vaccine encoding endogenous antigens are presented by MHC class I, facilitating cellular immune response.

We invite authors to share their research on nucleic acid vaccine development with respect to critical aspects not limited to i) design of vaccine with a potential to effectively respond and protect against pandemic pathogens such as COVID-19; ii) safe and effective vaccine delivery technologies; iii) strategies for cost-effective production and storage stability; iv) unique mechanistic insights into vaccine response, efficacy and long-term protection.  

Dr. Sofia Casares
Dr. Himanshu Batra
Dr. Swati Jain
Guest Editors

Manuscript Submission Information

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Keywords

  • DNA Vaccine
  • RNA Vaccine
  • vaccine delivery
  • immune responses
  • pandemic

Published Papers (5 papers)

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Research

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11 pages, 1769 KiB  
Article
Evaluation of the Neutralizing Antibodies Response against 14 SARS-CoV-2 Variants in BNT162b2 Vaccinated Naïve and COVID-19 Positive Healthcare Workers from a Northern Italian Hospital
by Josè Camilla Sammartino, Irene Cassaniti, Alessandro Ferrari, Federica Giardina, Guglielmo Ferrari, Federica Zavaglio, Stefania Paolucci, Daniele Lilleri, Antonio Piralla, Fausto Baldanti and Elena Percivalle
Vaccines 2022, 10(5), 703; https://0-doi-org.brum.beds.ac.uk/10.3390/vaccines10050703 - 29 Apr 2022
Cited by 4 | Viewed by 1661
Abstract
SARS-CoV-2 still represents a global health burden, causing more than six million deaths worldwide. Moreover, the emergence of new variants has posed new issues in terms of vaccine efficacy and immunogenicity. In this study, we aimed to evaluate the neutralizing antibody response against [...] Read more.
SARS-CoV-2 still represents a global health burden, causing more than six million deaths worldwide. Moreover, the emergence of new variants has posed new issues in terms of vaccine efficacy and immunogenicity. In this study, we aimed to evaluate the neutralizing antibody response against SARS-CoV-2 variants in different cohorts of vaccinated and unvaccinated subjects. Four-fold diluted sera from SARS-CoV-2 naïve and recovered subjects vaccinated with two or three doses of the BNT162b2 vaccine were challenged against 14 SARS-CoV-2 variants, and the SARS-CoV-2 neutralizing antibody titer was measured. Results were compared with those obtained from unvaccinated COVID-19 recovered patients. Overall, a better SARS-CoV-2 NT Abs response was observed in recovered vaccinated subjects after three doses of the vaccine when compared to unvaccinated patients and vaccinated subjects with only two doses. Additionally, the lowest level of response was observed against the Omicron variant. In conclusion, third doses of BNT162b2 vaccine seems to elicit a sustained response against the large majority of variants. Full article
(This article belongs to the Special Issue Nucleic Acid Vaccine)
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15 pages, 2270 KiB  
Article
Characterization of a Novel Chimeric Theileria parva p67 Antigen Which Incorporates into Virus-like Particles and Is Highly Immunogenic in Mice
by Leah Whittle, Ros Chapman, Michiel van Diepen, Edward P. Rybicki and Anna-Lise Williamson
Vaccines 2022, 10(2), 210; https://0-doi-org.brum.beds.ac.uk/10.3390/vaccines10020210 - 28 Jan 2022
Cited by 1 | Viewed by 2761
Abstract
The current method to protect cattle against East Coast Fever (ECF) involves the use of live Theileria parva sporozoites. Although this provides immunity, using live parasites has many disadvantages, such as contributing to the spread of ECF. Subunit vaccines based on the sporozoite [...] Read more.
The current method to protect cattle against East Coast Fever (ECF) involves the use of live Theileria parva sporozoites. Although this provides immunity, using live parasites has many disadvantages, such as contributing to the spread of ECF. Subunit vaccines based on the sporozoite surface protein p67 have been investigated as a replacement for the current method. In this study, two DNA vaccines expressing recombinant forms of p67 designed to display on retrovirus-like particles were constructed with the aim of improving immunogenicity. The native leader sequence was replaced with the human tissue plasminogen activator leader in both vaccines. The full-length p67 gene was included in the first DNA vaccine (p67); in the second, the transmembrane domain and cytoplasmic tail were replaced with those of an influenza A virus hemagglutinin 5 (p67HA). Immunofluorescent staining of fixed and live transfected mammalian cells showed that both p67 and p67HA were successfully expressed, and p67HA localised on the cell surface. Furthermore, p67HA was displayed on the surface of both bovine leukaemia virus (BLV) Gag and HIV-1 Gag virus-like particles (VLPs) made in the same cells. Mice vaccinated with DNA vaccines expressing p67 and p67HA alone, or p67HA with BLV or HIV-1 Gag, developed high titres of p67 and BLV Gag-binding antibodies. Here we show that it is possible to integrate a form of p67 containing all known antigenic domains into VLPs. This p67HA–VLP combination has the potential to be incorporated into a vaccine against ECF, as a DNA vaccine or as other vaccine platforms. Full article
(This article belongs to the Special Issue Nucleic Acid Vaccine)
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15 pages, 18300 KiB  
Article
Large-Scale Study of Antibody Titer Decay following BNT162b2 mRNA Vaccine or SARS-CoV-2 Infection
by Ariel Israel, Yotam Shenhar, Ilan Green, Eugene Merzon, Avivit Golan-Cohen, Alejandro A. Schäffer, Eytan Ruppin, Shlomo Vinker and Eli Magen
Vaccines 2022, 10(1), 64; https://0-doi-org.brum.beds.ac.uk/10.3390/vaccines10010064 - 31 Dec 2021
Cited by 145 | Viewed by 9184
Abstract
Immune protection following either vaccination or infection with SARS-CoV-2 is thought to decrease over time. We designed a retrospective study, conducted at Leumit Health Services in Israel, to determine the kinetics of SARS-CoV-2 IgG antibodies following administration of two doses of BNT162b2 vaccine, [...] Read more.
Immune protection following either vaccination or infection with SARS-CoV-2 is thought to decrease over time. We designed a retrospective study, conducted at Leumit Health Services in Israel, to determine the kinetics of SARS-CoV-2 IgG antibodies following administration of two doses of BNT162b2 vaccine, or SARS-CoV-2 infection in unvaccinated individuals. Antibody titers were measured between 31 January 2021, and 31 July 2021 in two mutually exclusive groups: (i) vaccinated individuals who received two doses of BNT162b2 vaccine and had no history of previous infection with COVID-19 and (ii) SARS-CoV-2 convalescents who had not received the vaccine. A total of 2653 individuals fully vaccinated by two doses of vaccine during the study period and 4361 convalescent patients were included. Higher SARS-CoV-2 IgG antibody titers were observed in vaccinated individuals (median 1581 AU/mL IQR [533.8–5644.6]) after the second vaccination than in convalescent individuals (median 355.3 AU/mL IQR [141.2–998.7]; p < 0.001). In vaccinated subjects, antibody titers decreased by up to 38% each subsequent month while in convalescents they decreased by less than 5% per month. Six months after BNT162b2 vaccination 16.1% subjects had antibody levels below the seropositivity threshold of <50 AU/mL, while only 10.8% of convalescent patients were below <50 AU/mL threshold after 9 months from SARS-CoV-2 infection. This study demonstrates individuals who received the Pfizer-BioNTech mRNA vaccine have different kinetics of antibody levels compared to patients who had been infected with the SARS-CoV-2 virus, with higher initial levels but a much faster exponential decrease in the first group. Full article
(This article belongs to the Special Issue Nucleic Acid Vaccine)
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Review

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13 pages, 3125 KiB  
Review
Nucleic Acid Vaccine Platform for DENGUE and ZIKA Flaviviruses
by Jarin Taslem Mourosi, Ayobami Awe, Swati Jain and Himanshu Batra
Vaccines 2022, 10(6), 834; https://0-doi-org.brum.beds.ac.uk/10.3390/vaccines10060834 - 24 May 2022
Cited by 5 | Viewed by 3330
Abstract
Dengue virus and Zika virus are mosquito-borne, single-stranded, positive-sense RNA viruses that belong to the Flaviviridae family. Both the viruses are closely related and have similarities with other flaviviruses. Dengue virus (DENV) causes a severe febrile illness with fever, joint pain, and rash [...] Read more.
Dengue virus and Zika virus are mosquito-borne, single-stranded, positive-sense RNA viruses that belong to the Flaviviridae family. Both the viruses are closely related and have similarities with other flaviviruses. Dengue virus (DENV) causes a severe febrile illness with fever, joint pain, and rash leading to a life-threatening condition in severe cases. While Zika virus (ZIKV) primarily causes mild fever, it can be passed from a pregnant mother to her fetus, resulting in severe birth defect microcephaly and even causing a rare autoimmune disease—Guillain–Barre syndrome. To date, there are no approved DENV and ZIKA vaccines available, except a Dengue vaccine (Dengvaxia, Sanofi Pasteur Inc., Lyon, France) recently approved to be used only for 9–16 years of age groups living in endemic areas and having a previous record of confirmed dengue infection. There are several potential vaccine candidates in the clinical trials based on multiple vaccine platforms, such as live attenuated, subunit, nucleic acid, and viral vector-based vaccines. In the current review, we have focused exclusively on the nucleic acid vaccine platform and discussed the progress of all the DNA/RNA vaccine candidates under preclinical and clinical studies for DENV and ZIKA viruses. Additionally, we have described a brief history of the emergence of these flaviviruses, major structural similarities between them, prominent vaccine targets, and the mechanism of virus entry and infection. Full article
(This article belongs to the Special Issue Nucleic Acid Vaccine)
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23 pages, 2922 KiB  
Review
Vaccine Design against Chagas Disease Focused on the Use of Nucleic Acids
by Edio Maldonado, Sebastian Morales-Pison, Fabiola Urbina and Aldo Solari
Vaccines 2022, 10(4), 587; https://0-doi-org.brum.beds.ac.uk/10.3390/vaccines10040587 - 12 Apr 2022
Cited by 5 | Viewed by 2560
Abstract
Chagas disease is caused by the protozoan Trypanosoma cruzi and is endemic to Central and South America. However, it has spread around the world and affects several million people. Treatment with currently available drugs cause several side effects and require long treatment times [...] Read more.
Chagas disease is caused by the protozoan Trypanosoma cruzi and is endemic to Central and South America. However, it has spread around the world and affects several million people. Treatment with currently available drugs cause several side effects and require long treatment times to eliminate the parasite, however, this does not improve the chronic effects of the disease such as cardiomyopathy. A therapeutic vaccine for Chagas disease may be able to prevent the disease and improve the chronic effects such as cardiomyopathy. This vaccine would be beneficial for both infected people and those which are at risk in endemic and non-endemic areas. In this article, we will review the surface antigens of T. cruzi, in order to choose those that are most antigenic and least variable, to design effective vaccines against the etiological agent of Chagas disease. Also, we discuss aspects of the design of nucleic acid-based vaccines, which have been developed and proven to be effective against the SARS-CoV-2 virus. The role of co-adjuvants and delivery carriers is also discussed. We present an example of a chimeric trivalent vaccine, based on experimental work, which can be used to design a vaccine against Chagas disease. Full article
(This article belongs to the Special Issue Nucleic Acid Vaccine)
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