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Article

Molecular and Phylogenomic Analysis of a Vancomycin Intermediate Resistance USA300LV Strain in Chile

by
Daniela Núñez
1,
Pablo Jiménez
2,
Marcelo Cortez-San Martín
1,
Carolina Cortés
1,
Matías Cárdenas
1,
Sofia Michelson
1,
Tamara Garay
3,
Maggie Vecchiola
3,
Alejandra Céspedes
3,
Jonathan E. Maldonado
2,4,* and
Yesseny Vásquez-Martínez
1,3,*
1
Molecular Virology and Pathogen Control Laboratory, Departamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Santiago 9170022, Chile
2
Laboratorio de Multiómica Vegetal y Bioinformática, Departamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Santiago 9170022, Chile
3
Escuela de Medicina, Facultad de Ciencias Médicas, Universidad de Santiago de Chile (USACH), Santiago 9170022, Chile
4
Millennium Institute for Integrative Biology (iBio), Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8380000, Chile
*
Authors to whom correspondence should be addressed.
Submission received: 13 May 2024 / Revised: 13 June 2024 / Accepted: 18 June 2024 / Published: 25 June 2024
(This article belongs to the Section Medical Microbiology)

Abstract

Antimicrobial resistance is a major global health problem, and, among Gram-positive bacteria, methicillin-resistant Staphylococcus aureus (MRSA) represents a serious threat. MRSA causes a wide range of infections, including bacteremia, which, due to the limited use of β-lactams, is difficult to treat. This study aimed to analyze 51 MRSA isolates collected in 2018 from samples of patients with bacteremia from two hospitals of the Metropolitan Health Service of Santiago, Chile, both in their resistance profile and in the identification of virulence factors. In addition, genomic characterization was carried out by the WGS of an isolate that was shown to be the one of greatest concern (N°. 42) due to its intermediate resistance to vancomycin, multiple virulence factors and being classified as ST8 PVL-positive. In our study, most of the isolates turned out to be multidrug-resistant, but there are still therapeutic options, such as tetracycline, rifampicin, chloramphenicol and vancomycin, which are currently used for MRSA infections; however, 18% were PVL positive, which suggests greater virulence of these isolates. It was determined that isolate N°42 is grouped within the USA300-LV strains (ST8, PVL+, COMER+); however, it has been suggested that, in Chile, a complete displacement of the PVL-negative ST5 clone has not occurred.
Keywords: MRSA; antibiotic resistance; molecular characterization; WGS MRSA; antibiotic resistance; molecular characterization; WGS

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MDPI and ACS Style

Núñez, D.; Jiménez, P.; Martín, M.C.-S.; Cortés, C.; Cárdenas, M.; Michelson, S.; Garay, T.; Vecchiola, M.; Céspedes, A.; Maldonado, J.E.; et al. Molecular and Phylogenomic Analysis of a Vancomycin Intermediate Resistance USA300LV Strain in Chile. Microorganisms 2024, 12, 1284. https://0-doi-org.brum.beds.ac.uk/10.3390/microorganisms12071284

AMA Style

Núñez D, Jiménez P, Martín MC-S, Cortés C, Cárdenas M, Michelson S, Garay T, Vecchiola M, Céspedes A, Maldonado JE, et al. Molecular and Phylogenomic Analysis of a Vancomycin Intermediate Resistance USA300LV Strain in Chile. Microorganisms. 2024; 12(7):1284. https://0-doi-org.brum.beds.ac.uk/10.3390/microorganisms12071284

Chicago/Turabian Style

Núñez, Daniela, Pablo Jiménez, Marcelo Cortez-San Martín, Carolina Cortés, Matías Cárdenas, Sofia Michelson, Tamara Garay, Maggie Vecchiola, Alejandra Céspedes, Jonathan E. Maldonado, and et al. 2024. "Molecular and Phylogenomic Analysis of a Vancomycin Intermediate Resistance USA300LV Strain in Chile" Microorganisms 12, no. 7: 1284. https://0-doi-org.brum.beds.ac.uk/10.3390/microorganisms12071284

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