Molecular Mechanism of Histone Modification and Gene Regulation

A special issue of Biology (ISSN 2079-7737). This special issue belongs to the section "Medical Biology".

Deadline for manuscript submissions: closed (31 August 2021) | Viewed by 6610

Special Issue Editors


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Guest Editor
Department of Biology, Chungbuk National University, Chungbuk 28644, Republic of Korea
Interests: histone cleavage; histone modification; gene regulation; cell fate
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Guest Editor
College of Pharmacy, Gachon University, Incheon, Korea
Interests: epigenetics; gene expression; age-related macular degeneration; histone methylation; autophagy
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Histones undergo a variety of post-translational modifications (PTMs) including acetylation, methylation, phosphorylation, and ubiquitylation, among numerous others. These PTMs can impact gene expression by altering chromatin structure or recruiting reader proteins. Aberrant histone modifications are linked to the pathogenesis of diseases such as cancers as well as inflammatory and metabolic diseases. Thus, elucidating the molecular mechanisms by which histone modifications regulate gene expression is critical to understanding disease development.

This Special Issue invites original articles and reviews focusing on the broad topic of histone modifications and gene regulation related to cell differentiation, environmental stress, and human disease.

Dr. Kyunghwan Kim
Dr. Kwang Won Jeong
Guest Editors

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Keywords

  • nucleosome
  • histone modification
  • gene expression
  • chromatin
  • cell differentiation
  • environmental stress
  • human disease

Published Papers (2 papers)

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Research

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13 pages, 2754 KiB  
Article
Transcriptome Analysis Reveals That Abeliophyllum distichum Nakai Extract Inhibits RANKL-Mediated Osteoclastogenensis Mainly through Suppressing Nfatc1 Expression
by Kyubin Lee, You-Jee Jang, Hyerim Lee, Eunbin Kim, Yeojin Kim, Tong-Kewn Yoo, Tae Kyung Hyun, Jae-Il Park, Sun-Ju Yi and Kyunghwan Kim
Biology 2020, 9(8), 212; https://0-doi-org.brum.beds.ac.uk/10.3390/biology9080212 - 06 Aug 2020
Cited by 9 | Viewed by 2775
Abstract
Abeliophyllum distichum Nakai is known as a monotypic genus endemic to South Korea. Currently, several pharmacological studies have revealed that A. distichum extract exhibits diverse biological functions, including anti-cancer, anti-diabetic, anti-hypertensive, and anti-inflammatory activities. In this study, we present the anti-osteoporotic activity of [...] Read more.
Abeliophyllum distichum Nakai is known as a monotypic genus endemic to South Korea. Currently, several pharmacological studies have revealed that A. distichum extract exhibits diverse biological functions, including anti-cancer, anti-diabetic, anti-hypertensive, and anti-inflammatory activities. In this study, we present the anti-osteoporotic activity of A. distichum extract by inhibiting osteoclast formation. First, we show that the methanolic extract of the leaves of A. distichum, but not extracts of the branches or fruits, significantly inhibits receptor activator of the NF-κB ligand (RANKL)-induced osteoclast differentiation. Second, our transcriptome analysis revealed that the leaf extract (LE) blocks sets of RANKL-mediated osteoclast-related genes. Third, the LE attenuates the phosphorylation of extracellular signal-related kinase. Finally, treatment with the LE effectively prevents postmenopausal bone loss in ovariectomized mice and glucocorticoid-induced osteoporosis in zebrafish. Our findings show that the extract of A. distichum efficiently suppressed osteoclastogenesis by regulating osteoclast-related genes, thus offering a novel therapeutic strategy for osteoporosis. Full article
(This article belongs to the Special Issue Molecular Mechanism of Histone Modification and Gene Regulation)
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Review

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32 pages, 10485 KiB  
Review
Histone H3K4 Methyltransferases as Targets for Drug-Resistant Cancers
by Liu Yang, Mingli Jin and Kwang Won Jeong
Biology 2021, 10(7), 581; https://0-doi-org.brum.beds.ac.uk/10.3390/biology10070581 - 25 Jun 2021
Cited by 19 | Viewed by 3388
Abstract
The KMT2 (MLL) family of proteins, including the major histone H3K4 methyltransferase found in mammals, exists as large complexes with common subunit proteins and exhibits enzymatic activity. SMYD, another H3K4 methyltransferase, and SET7/9 proteins catalyze the methylation of several non-histone targets, in addition [...] Read more.
The KMT2 (MLL) family of proteins, including the major histone H3K4 methyltransferase found in mammals, exists as large complexes with common subunit proteins and exhibits enzymatic activity. SMYD, another H3K4 methyltransferase, and SET7/9 proteins catalyze the methylation of several non-histone targets, in addition to histone H3K4 residues. Despite these structural and functional commonalities, H3K4 methyltransferase proteins have specificity for their target genes and play a role in the development of various cancers as well as in drug resistance. In this review, we examine the overall role of histone H3K4 methyltransferase in the development of various cancers and in the progression of drug resistance. Compounds that inhibit protein–protein interactions between KMT2 family proteins and their common subunits or the activity of SMYD and SET7/9 are continuously being developed for the treatment of acute leukemia, triple-negative breast cancer, and castration-resistant prostate cancer. These H3K4 methyltransferase inhibitors, either alone or in combination with other drugs, are expected to play a role in overcoming drug resistance in leukemia and various solid cancers. Full article
(This article belongs to the Special Issue Molecular Mechanism of Histone Modification and Gene Regulation)
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