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Advances in Molecular Studies of Solid Tumors

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Pathology, Diagnostics, and Therapeutics".

Deadline for manuscript submissions: closed (15 November 2022) | Viewed by 4476

Special Issue Editor


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Guest Editor
Mosaic Oncology, Vestre Svanholmen 14, 4313 Sandnes, Norway
Interests: GI- and urogenital tumors; pancreatic cancer; lung cancer; lymphomas; cancer biology/molecular cell biology; chronobiology; circadian rhythms; circadian clocks; cancer cell metabolism; hematopoiesis; flow cytometry; metastasis; tumor microenvironment; cancer immunology; cell proliferation; molecular oncology; epithelial-mesenchymal transition; cancer cell signaling; cancer metastasis; signal transduction; tumour markers; prognostic markers; tumor genetics; gene expression; cell invasion; circulating tumor DNA/cells

Special Issue Information

Dear Colleagues,

Cancer must be considered a genetic disease and the accumulation of molecular alterations in the genome of somatic cells is a prerequisite for cancer progression. New discoveries and insights are transforming the field of oncology at multiple levels, and at an increasing speed. For instance, the genomic maps are redesigning the tumour taxonomy by moving it from a histological to a molecular-based level. Tumour genotyping is thus increasingly assisting clinicians to individualize treatments by matching patients with the best treatment for their tumours. Furthermore, the success of cancer drugs designed to target the molecular alterations underlying tumorigenesis has proven that somatic genetic alterations are valid targets for therapy. In this issue, we will focus on central aspects of clinical tumour progression as well as relating the tumour to its global environment of the organism by addressing essential molecular aspects of cancer development.

For the cancer cells to migrate, they are dependent on their inherent cell-autonomous properties, as well as their microenvironment and the mesenchymal cells surrounding them. Thus, assemblies of diverse cell types associated with and surrounding malignant lesions are increasingly documented to be functionally important for the manifestation of symptomatic disease.

Some pleiotropic acting transcriptional factors are causally important for programming invasion, while others have been found to elicit metastasis, possibly by facilitating the spread of tumour cells by establishing mesenchymal-like traits of the original epithelial cells, so-called epithelial-to-mesenchymal transition (EMT).

Circulating tumour cells (CTCs) and circulating tumour DNA (ctDNA) can now, in detail and by novel molecular techniques, be demonstrated in the blood stream and may serve as so-called liquid biopsy, becoming a new and increasingly important field of translational and clinical research. CTCs and ctDNA may provide data regarding the presence of minimal residual disease after surgery or after completion of adjuvant treatment and thus identify patients with high risk of relapse. Moreover, CTCs and ctDNA may be used to monitor the effect of ongoing systemic treatment, to reveal resistance to treatment, or even to detect relapse early.

Through the technical development of new biochemical tools such as metabolomics, studies of cancer cell metabolism have extended our knowledge of the mechanisms and role of the metabolic reprogramming in cancer for tumor growth, metastasis, and drug resistance.

This SI will also address the advent of novel immunomodulatory strategies targeting immune checkpoints, thus meaning that the field of systemic cancer therapy for metastatic disease has entered an exciting new era. Indeed, the time of personalised medicine has now definitely arrived, as new immunomodulatory techniques and technological innovations continue to advance the field of cancer immunotherapy. We will adress this important topic using a chemotherapy-resistant tumour, i.e. kidney cancer (or pancreatic adenocarcinoma), as an example of the progress in this new field of cancer therapeutics.

Finally, an intimate link between the disruption of circadian rhythms and cancer has been demonstrated. The past two decades have witnessed an enormous transformation in the understanding of the molecular underpinnings of biological clocks in model organisms, rewarded by the Nobel Prize in 2017, and thereby a long overdue scientific acknowledgment of the importance of temporal aspects also in mammal biology. Thus, preclinical and clinical studies have demonstrated that circadian biology has the potential of becoming a critical factor for improving drug efficacy and diminishing drug toxicity. Indeed, it is now time that circadian aspects become an integral part of translational research, including the pre-clinical and clinical research taking circadian time into consideration along the clinical phases of the development of new drugs.

Dr. Rune Smaaland
Guest Editor

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. International Journal of Molecular Sciences is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. There is an Article Processing Charge (APC) for publication in this open access journal. For details about the APC please see here. Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • Tumour genotyping
  • tumour taxonomy
  • microenvironment
  • mesenchymal cells
  • EMT
  • CTCs
  • ctDNA
  • metabolomics
  • metabolic reprogramming
  • biological clocks
  • circadian
  • chronotherapy
  • bone marrow (BM)
  • DNA replication
  • immunomodulatory
  • kidney cancer

Published Papers (2 papers)

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19 pages, 2815 KiB  
Article
Melatonin Regulates the Daily Levels of Plasma Amino Acids, Acylcarnitines, Biogenic Amines, Sphingomyelins, and Hexoses in a Xenograft Model of Triple Negative Breast Cancer
by Rubens Paula Junior, Luiz Gustavo de Almeida Chuffa, Vinicius Augusto Simão, Nathália Martins Sonehara, Roger Chammas, Russel J. Reiter and Debora Aparecida Pires de Campos Zuccari
Int. J. Mol. Sci. 2022, 23(16), 9105; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms23169105 - 14 Aug 2022
Cited by 5 | Viewed by 2033
Abstract
Metabolic dysregulation as a reflection of specific metabolite production and its utilization is a common feature of many human neoplasms. Melatonin, an indoleamine that is highly available during darkness, has a variety of metabolic functions in solid tumors. Because plasma metabolites undergo circadian [...] Read more.
Metabolic dysregulation as a reflection of specific metabolite production and its utilization is a common feature of many human neoplasms. Melatonin, an indoleamine that is highly available during darkness, has a variety of metabolic functions in solid tumors. Because plasma metabolites undergo circadian changes, we investigated the role of melatonin on the profile of amino acids (AAs), biogenic amines, carnitines, sphingolipids, and hexoses present in the plasma of mice bearing xenograft triple negative breast cancer (MDA-MB-231 cells) over 24 h. Plasma concentrations of nine AAs were reduced by melatonin, especially during the light phase, with a profile closer to that of non-breast cancer (BC) animals. With respect to acylcarnitine levels, melatonin reduced 12 out of 24 molecules in BC-bearing animals compared to their controls, especially at 06:00 h and 15:00 h. Importantly, melatonin reduced the concentrations of asymmetric dimethylarginine, carnosine, histamine, kynurenine, methionine sulfoxide, putrescine, spermidine, spermine, and symmetric dimethylarginine, which are associated with the BC metabolite sets. Melatonin also led to reduced levels of sphingomyelins and hexoses, which showed distinct daily variations over 24 h. These results highlight the role of melatonin in controlling the levels of plasma metabolites in human BC xenografts, which may impact cancer bioenergetics, in addition to emphasizing the need for a more accurate examination of its metabolomic changes at different time points. Full article
(This article belongs to the Special Issue Advances in Molecular Studies of Solid Tumors)
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13 pages, 1500 KiB  
Article
Cancer Cells Haploinsufficient for ATM Are Sensitized to PARP Inhibitors by MET Inhibition
by Concetta D’Ambrosio, Jessica Erriquez, Sonia Capellero, Simona Cignetto, Maria Alvaro, Eric Ciamporcero, Maria Flavia Di Renzo, Timothy Perera, Giorgio Valabrega and Martina Olivero
Int. J. Mol. Sci. 2022, 23(10), 5770; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms23105770 - 21 May 2022
Cited by 2 | Viewed by 1751
Abstract
The MET oncogene encodes a tyrosine kinase (TK) receptor. Its activation protects cells from death but also stimulates DNA damage response by triggering excess replicative stress. Transcriptomic classification of cancer cell lines based on MET expression showed that response to the PARP inhibitor [...] Read more.
The MET oncogene encodes a tyrosine kinase (TK) receptor. Its activation protects cells from death but also stimulates DNA damage response by triggering excess replicative stress. Transcriptomic classification of cancer cell lines based on MET expression showed that response to the PARP inhibitor (PARPi) olaparib is poorer in MET overexpressing cell lines. Accordingly, a high MET expressing lung carcinoma cell line was sensitized to PARPi by MET TK inhibition. This was not linked solely to MET overexpression: other MET overexpressing cell lines were biochemically but not functionally responsive to combined inhibition. Moreover, exogenously induced MET overexpression was unable to induce resistance to PARPi. The MET overexpressing cell line, responsive to the combined PARP and MET inhibition, carried a heterozygous mutation of the ATM gene and showed an attenuated response of ATM to PARPi. Among the downstream targets of ATM activation, NuMA was phosphorylated only in response to the combined PARP and MET inhibition. Given the role played by NuMA in mitosis, data show that the latter is affected by MET and PARP inhibition in cells with haploinsufficient ATM. This is important as ATM heterozygous mutation is frequently found in human cancer and in lung carcinomas in particular. Full article
(This article belongs to the Special Issue Advances in Molecular Studies of Solid Tumors)
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