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Molecular Approaches to Male Infertility: From Diagnosis to Decision-Making

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Endocrinology and Metabolism".

Deadline for manuscript submissions: 20 September 2024 | Viewed by 3576

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Guest Editor
1. Glickman Urological & Kidney Institute, Cleveland Clinic Foundation, Cleveland, OH 44195, USA
2. Department of Clinical and Experimental Medicine, University of Catania, 95123 Catania, Italy
Interests: male infertility; reproductive endocrinology; general endocrinology; andrology; sexual health
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Dear Colleagues,

Affecting 2–12% of men globally, male infertility is a common condition that alone or in combination with other aspects is the main contributing factor in approximately 50% of couples seeking fertility treatment. The overall prevalence of male infertility is likely to be underestimated and is set to increase due to the downward trend in sperm concentration and total sperm count over the decades. Therefore, investigating the causes of male infertility and offering therapeutic solutions is essential.

Semen analysis is the first step in the diagnostic evaluation of male infertility. It can show alterations in conventional sperm parameters, with pictures of oligozoospermia, asthenozoospermia, teratozoospermia, and/or azoospermia. Abnormalities of the so-called biofunctional sperm parameters reflect the presence of mitochondrial dysfunction, sperm apoptosis, abnormal chromatin compactness, and/or DNA fragmentation.

Worryingly, despite careful diagnostic work-up, the etiology of male infertility remains unclear in many cases, and, according to some studies, can reach 70%. Advances in molecular biology and “omics” technologies has allowed us a clearer understanding of the fine mechanisms that regulate spermatogenesis, fertilization, and even embryogenesis. Custom-made gene panels using next-generation sequencing (NGS) have allowed the identification of several genes that appear to play a role in the etiology of apparently idiopathic non-obstructive azoospermia (NOA) or even severe oligozoospermia. Recently, research has focused on the possible predictive role of specific gene mutations as they relate to testicular histology, thus granting these panels not only a role in formulating a diagnosis but also in the decision-making process. However, further experimental evidence is needed.

The epigenome is defined as the cellular DNA methylation model. Spermatozoa have a unique pattern of methylation that is completely different from that of somatic cells. Indeed, the DNA of sperm is highly packaged and transcriptional activity is repressed for most of the genes. Furthermore, the sperm methylation pattern of infertile patients differs from that of fertile men, in particular in imprinted genes for which the methylation pattern is inherited by the embryo.

The study of the sperm transcriptome in mice has suggested a role of sperm RNAs in the regulation of spermatogenesis and embryo growth. Furthermore, sperm-carried RNAs can also influence the phenotype of the offspring and their susceptibility to develop several diseases, such as diabetes, depression, etc. Translational research is urgently needed to evaluate whether these mechanisms also occur in humans and the implications of these discoveries in clinical practice.

The evaluation of the proteome in the seminal fluid and spermatozoa has demonstrated a role in fertility. Consequently, sperm-carried specific proteins appear to promote embryo growth and development. Therefore, they represent useful diagnostic targets in patients with idiopathic infertility. Furthermore, proteins in the seminal fluid can accurately predict the chance of sperm recovery after TESE in patients with NOA.

The metabolome is defined as the overall presence of metabolites in a given tissue. Scant data are available on the sperm metabolome, although it appears to differ in infertile patients compared with fertile controls. Finally, in recent years, a great deal of attention has been paid to better understanding the impact of the seminal fluid microbiome on male fertility. In particular, it has been suggested that the microbiome can change under specific diseases (e.g., varicocele, male urogenital tract infections, etc.) with a possible impact on the metabolome and even the sperm epigenome. However, many aspects remain to be clarified.

Despite the growing amount of published research on the molecular biology of male infertility, the male partner is still neglected in the diagnostic work-up of the infertile couple. Consequently, the international guidelines that regulate procedures and best practices in assisted reproductive technique (ART) centers do not account for the presence of an andrologist. Even today, ART centers are led by embryologists and gynecologists who do not have the skills for the comprehensive diagnostic and therapeutic management of infertile male patients, despite evidence to suggest that the treatment of male infertility leads to an improvement in ART outcomes.

This Special Issue aims to collect original and review articles on the use of “omics” technology in the field of male infertility, highlighting its role in diagnosis, prognosis, decision making, and offspring health. Finally, articles on the importance of an adequate diagnostic workup and the treatment of male partners in the ART setting are welcome.

Dr. Rossella Cannarella
Prof. Dr. Aldo E. Calogero
Guest Editors

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Keywords

  • male infertility
  • sperm
  • omics
  • epigenome
  • transcriptome
  • proteome
  • metabolome
  • assisted reproductive technique (ART)

Published Papers (3 papers)

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12 pages, 2293 KiB  
Communication
A Pilot Analysis of Whole Transcriptome of Human Cryopreserved Sperm
by Sara Stigliani, Adriana Amaro, Francesco Reggiani, Elena Maccarini, Claudia Massarotti, Matteo Lambertini, Paola Anserini and Paola Scaruffi
Int. J. Mol. Sci. 2024, 25(7), 4131; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms25074131 - 08 Apr 2024
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Abstract
Sperm cryopreservation is a procedure widely used to store gametes for later use, to preserve fertility in patients prior to gonadotoxic treatments or surgery, and for sperm donation programs. The purpose of the study was to assess the impact of cryopreservation on human [...] Read more.
Sperm cryopreservation is a procedure widely used to store gametes for later use, to preserve fertility in patients prior to gonadotoxic treatments or surgery, and for sperm donation programs. The purpose of the study was to assess the impact of cryopreservation on human sperm transcriptome. Semen samples were collected from 13 normospermic men. Each sample was divided into two aliquots. The total RNA was immediately extracted from one aliquot. The second aliquot was frozen and total RNA was extracted after a week of storage in liquid nitrogen. The RNA samples were randomized in four pools, each of six donors, and analyzed by microarrays. The paired Significance Analysis of Microarray was performed. We found 219 lower abundant transcripts and 28 higher abundant transcripts in cryopreserved sperm than fresh sperm. The gene ontology analysis disclosed that cryopreservation alters transcripts of pathways important for fertility (i.e., spermatogenesis, sperm motility, mitochondria function, fertilization, calcium homeostasis, cell differentiation, and early embryo development), although the increase of some transcripts involved in immune response can compensate for the harmful effects of freezing. Full article
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20 pages, 1142 KiB  
Article
Unveiling the Genetic Complexity of Teratozoospermia: Integrated Genomic Analysis Reveals Novel Insights into lncRNAs’ Role in Male Infertility
by Maria-Anna Kyrgiafini, Themistoklis Giannoulis, Alexia Chatziparasidou, Nikolaos Christoforidis and Zissis Mamuris
Int. J. Mol. Sci. 2023, 24(19), 15002; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms241915002 - 09 Oct 2023
Cited by 1 | Viewed by 1069
Abstract
Male infertility is a global health issue, affecting over 20 million men worldwide. Genetic factors are crucial in various male infertility forms, including teratozoospermia. Nonetheless, the genetic causes of male infertility remain largely unexplored. In this study, we employed whole-genome sequencing and RNA [...] Read more.
Male infertility is a global health issue, affecting over 20 million men worldwide. Genetic factors are crucial in various male infertility forms, including teratozoospermia. Nonetheless, the genetic causes of male infertility remain largely unexplored. In this study, we employed whole-genome sequencing and RNA expression analysis to detect differentially expressed (DE) long-noncoding RNAs (lncRNAs) in teratozoospermia, along with mutations that are exclusive to teratozoospermic individuals within these DE lncRNAs regions. Bioinformatic tools were used to assess variants’ impact on lncRNA structure, function, and lncRNA–miRNA interactions. Our analysis identified 1166 unique mutations in teratozoospermic men within DE lncRNAs, distinguishing them from normozoospermic men. Among these, 64 variants in 23 lncRNAs showed potential regulatory roles, 7 variants affected 4 lncRNA structures, while 37 variants in 17 lncRNAs caused miRNA target loss or gain. Pathway Enrichment and Gene Ontology analyses of the genes targeted by the affected miRNAs revealed dysregulated pathways in teratozoospermia and a link between male infertility and cancer. This study lists novel variants and lncRNAs associated for the first time with teratozoospermia. These findings pave the way for future studies aiming to enhance diagnosis and therapy in the field of male infertility. Full article
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17 pages, 5736 KiB  
Case Report
Genetic Analysis of Patients with Congenital Hypogonadotropic Hypogonadism: A Case Series
by Rossella Cannarella, Carmelo Gusmano, Rosita A. Condorelli, Andrea Bernini, Jurgen Kaftalli, Paolo Enrico Maltese, Stefano Paolacci, Astrit Dautaj, Giuseppe Marceddu, Matteo Bertelli, Sandro La Vignera and Aldo E. Calogero
Int. J. Mol. Sci. 2023, 24(8), 7428; https://0-doi-org.brum.beds.ac.uk/10.3390/ijms24087428 - 18 Apr 2023
Cited by 1 | Viewed by 1199
Abstract
Congenital hypogonadotropic hypogonadism (cHH)/Kallmann syndrome (KS) is a rare genetic disorder with variable penetrance and a complex inheritance pattern. Consequently, it does not always follow Mendelian laws. More recently, digenic and oligogenic transmission has been recognized in 1.5–15% of cases. We report the [...] Read more.
Congenital hypogonadotropic hypogonadism (cHH)/Kallmann syndrome (KS) is a rare genetic disorder with variable penetrance and a complex inheritance pattern. Consequently, it does not always follow Mendelian laws. More recently, digenic and oligogenic transmission has been recognized in 1.5–15% of cases. We report the results of a clinical and genetic investigation of five unrelated patients with cHH/KS analyzed using a customized gene panel. Patients were diagnosed according to the clinical, hormonal, and radiological criteria of the European Consensus Statement. DNA was analyzed using next-generation sequencing with a customized panel that included 31 genes. When available, first-degree relatives of the probands were also analyzed to assess genotype–phenotype segregation. The consequences of the identified variants on gene function were evaluated by analyzing the conservation of amino acids across species and by using molecular modeling. We found one new pathogenic variant of the CHD7 gene (c.576T>A, p.Tyr1928) and three new variants of unknown significance (VUSs) in IL17RD (c.960G>A, p.Met320Ile), FGF17 (c.208G>A, p.Gly70Arg), and DUSP6 (c.434T>G, p.Leu145Arg). All were present in the heterozygous state. Previously reported heterozygous variants were also found in the PROK2 (c.163del, p.Ile55*), CHD7 (c.c.2750C>T, p.Thr917Met and c.7891C>T, p.Arg2631*), FLRT3 (c.1106C>T, p.Ala369Val), and CCDC103 (c.461A>C, p.His154Pro) genes. Molecular modeling, molecular dynamics, and conservation analyses were performed on three out of the nine variants identified in our patients, namely, FGF17 (p.Gly70Arg), DUSP6 (p.Leu145Arg), and CHD7 p.(Thr917Met). Except for DUSP6, where the L145R variant was shown to disrupt the interaction between β6 and β3, needed for extracellular signal-regulated kinase 2 (ERK2) binding and recognition, no significant changes were identified between the wild-types and mutants of the other proteins. We found a new pathogenic variant of the CHD7 gene. The molecular modeling results suggest that the VUS of the DUSP6 (c.434T>G, p.Leu145Arg) gene may play a role in the pathogenesis of cHH. However, our analysis indicates that it is unlikely that the VUSs for the IL17RD (c.960G>A, p.Met320Ile) and FGF17 (c.208G>A, p.Gly70Arg) genes are involved in the pathogenesis of cHH. Functional studies are needed to confirm this hypothesis. Full article
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